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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
RRBS
2
WGBS
1
Hi-C
Assay category
7
DNA methylation
1
3D chromatin structure
Date released
5
July, 2019
2
August, 2017
1
August, 2021
Available data
737
bam
701
bigWig
502
tsv
258
bed narrowPeak
132
bigBed narrowPeak
105
bed bed3+
101
fastq
88
bed broadPeak
87
bigBed broadPeak
64
xls
62
txt
22
tagAlign
7
bed bedMethyl
7
bigBed bedMethyl
6
bed bed3
5
csv
4
bed bedgraph
1
bedpe bed3+
1
hdf5
1
hic
Organism
8
Homo sapiens
Biosample type
4
primary cell
4
tissue
Organ
13
pancreas
12
epithelium
11
heart
6
musculature of body
5
kidney
5
liver
5
vasculature
4
blood vessel
3
connective tissue
2
adipose tissue
2
brain
2
spleen
2
vein
1
eye
1
limb
1
pericardium
Project
8
AMP
Genome assembly (visualization)
6
hg19
2
GRCh38
Lab
7
AMP-T2D consortium
1
Katalin Susztak, Upenn
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
8 results
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RRBS
WGBS
Hi-C
primary cell
cardiac fibroblast
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
renal cortical epithelial cell
1
tissue
adipose tissue
2
kidney
1
1
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