Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
534
total RNA-seq
68
single cell RNA-seq
4
small RNA-seq
Assay category
606
Transcription
205
DNA binding
197
DNA accessibility
11
DNA methylation
2
3D chromatin structure
Date released
454
February, 2021
57
August, 2021
47
September, 2023
22
July, 2019
6
October, 2019
4
February, 2023
4
May, 2023
4
November, 2020
2
April, 2018
2
February, 2020
2
July, 2018
1
December, 2019
1
May, 2021
Available data
493
tsv
486
bam
486
bigWig
62
txt
5
csv
3
fastq
Organism
606
Homo sapiens
Biosample type
572
tissue
21
primary cell
9
in vitro differentiated cells
4
cell line
Organ
481
connective tissue
479
pancreas
401
adipose tissue
201
epithelium
193
liver
166
heart
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
0
small intestine
Project
559
AMP
47
KPMP
Genome assembly (visualization)
487
GRCh38
487
hg19
Lab
499
AMP-T2D consortium
60
Katalin Susztak, Upenn
47
KPMP
Audit category:
5
audit script error
5
inconsistent ontology term
BIOSAMPLE
ASSAY
606 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
adipose tissue
382
kidney
49
64
bone tissue
58
subcutaneous adipose tissue
7
1
omental fat pad
5
1
+ See 2 more…
primary cell
osteoblast
5
pancreatic stellate cell
4
mesenchymal stem cell of adipose
1
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
+ See 8 more…
in vitro differentiated cells
adipocyte
5
immature adipocyte
2
cardiac fibroblast
1
preadipocyte
1
cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
See all biosamples
Download