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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
32
histone
32
histone modification
18
narrow histone mark
16
control
14
broad histone mark
11
transcription factor
7
recombinant protein
1
RNA binding protein
Date released
18
April, 2019
6
December, 2017
6
February, 2018
2
October, 2019
Available data
32
bam
31
bed narrowPeak
31
bigWig
18
bigBed narrowPeak
12
fastq
2
bed bed3+
Organism
32
Homo sapiens
Biosample type
20
tissue
12
in vitro differentiated cells
primary cell
Organ
184
brain
99
liver
95
heart
93
pancreas
70
connective tissue
54
blood vessel
54
vasculature
49
limb
32
adipose tissue
27
epithelium
25
musculature of body
24
nerve
20
artery
20
kidney
12
embryo
6
spleen
4
gonad
4
ovary
2
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
32
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
32
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
biosample_type!
primary cell
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
tissue
kidney
20
in vitro differentiated cells
pancreatic endoderm
10
Hepatic endoderm
2
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