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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
42
histone
42
histone modification
23
narrow histone mark
19
broad histone mark
19
control
13
transcription factor
7
recombinant protein
3
RNA binding protein
Date released
11
April, 2019
10
October, 2019
4
December, 2017
3
February, 2018
3
May, 2019
1
June, 2019
Available data
32
bam
31
bed narrowPeak
31
bigWig
14
bigBed narrowPeak
7
fastq
1
bed bed3+
Organism
32
Homo sapiens
Biosample type
11
tissue
7
cell line
7
in vitro differentiated cells
7
primary cell
Organ
380
liver
97
pancreas
84
connective tissue
74
heart
73
brain
54
vasculature
53
blood vessel
53
epithelium
51
blood
51
bodily fluid
37
adipose tissue
34
limb
25
kidney
20
musculature of body
19
artery
16
nerve
10
spleen
9
vein
7
embryo
1
eye
Project
32
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
32
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
tissue
kidney
11
cell line
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
in vitro differentiated cells
pancreatic endoderm
7
primary cell
epithelial cell of proximal tubule
4
kidney epithelial cell
3
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