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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
86
ChIP-seq
7
total RNA-seq
4
Hi-C
3
WGBS
1
pCHi-C
Assay category
86
DNA binding
DNA accessibility
7
Transcription
4
3D chromatin structure
3
DNA methylation
Target of assay
55
histone
55
histone modification
38
broad histone mark
25
control
17
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
63
October, 2019
8
November, 2018
7
December, 2018
7
January, 2019
7
May, 2019
5
July, 2019
3
February, 2020
1
March, 2020
Available data
92
bam
67
bigWig
60
bed narrowPeak
60
bigBed narrowPeak
22
fastq
8
tsv
3
bed bedMethyl
3
bigBed bedMethyl
Organism
101
Homo sapiens
Biosample type
101
tissue
Organ
773
pancreas
762
liver
650
connective tissue
483
adipose tissue
401
epithelium
276
heart
249
brain
191
kidney
178
vasculature
174
blood vessel
147
bone element
92
artery
78
limb
61
musculature of body
60
blood
60
bodily fluid
40
nerve
37
embryo
29
eye
23
spleen
19
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
101
AMP
Genome assembly (visualization)
66
GRCh38
64
hg19
Lab
101
AMP-T2D consortium
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
101 results
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ChIP-seq
total RNA-seq
Hi-C
WGBS
pCHi-C
tissue
tibial nerve
35
5
tibial artery
23
1
spleen
20
2
1
muscle of leg
7
1
gastrocnemius medialis
1
4
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