Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
36
DNase-seq
ATAC-seq
7
total RNA-seq
4
Hi-C
1
WGBS
Assay category
59
DNA binding
36
DNA accessibility
7
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
43
histone
43
histone modification
30
broad histone mark
16
control
13
narrow histone mark
Date released
67
October, 2019
32
June, 2019
May, 2019
5
July, 2019
3
February, 2020
Available data
99
bam
83
bigWig
78
bed narrowPeak
78
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
107
Homo sapiens
Biosample type
107
tissue
Organ
792
pancreas
768
liver
659
connective tissue
485
adipose tissue
416
epithelium
285
heart
274
kidney
254
brain
147
bone element
140
vasculature
134
blood vessel
107
limb
91
artery
88
musculature of body
68
blood
68
bodily fluid
42
nerve
37
embryo
33
eye
24
spleen
22
vein
20
lung
18
ureter
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
107
AMP
Genome assembly (visualization)
83
GRCh38
82
hg19
Lab
107
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
ATAC-seq
month_released!
May, 2019
BIOSAMPLE
ASSAY
107 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
35
2
5
tibial artery
23
2
1
muscle of arm
17
muscle of leg
13
1
gastrocnemius medialis
1
4
+ See 3 more…
See all biosamples
Download