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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
36
DNase-seq
21
total RNA-seq
8
ATAC-seq
4
Hi-C
1
GRO-seq
1
WGBS
Assay category
88
DNA binding
Target of assay
61
histone
61
histone modification
38
broad histone mark
24
control
23
narrow histone mark
3
transcription factor
Date released
59
October, 2019
13
December, 2017
9
February, 2018
7
May, 2019
Available data
87
bam
62
bed narrowPeak
62
bigWig
48
bigBed narrowPeak
22
fastq
3
bed bed3+
Organism
88
Homo sapiens
Biosample type
66
tissue
22
in vitro differentiated cells
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
88
AMP
Genome assembly (visualization)
63
hg19
62
GRCh38
Lab
88
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
3
inconsistent control read length
BIOSAMPLE
ASSAY
88 results
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ChIP-seq
tissue
tibial nerve
35
tibial artery
23
muscle of leg
7
islet of Langerhans
1
in vitro differentiated cells
pancreatic endoderm
18
Hepatic endoderm
4
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