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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
284
ChIP-seq
68
DNase-seq
24
total RNA-seq
12
ATAC-seq
7
Hi-C
4
small RNA-seq
3
single cell RNA-seq
2
RRBS
2
pCHi-C
1
FAIRE-seq
1
WGBS
Assay category
68
DNA accessibility
Date released
62
June, 2019
4
October, 2019
2
November, 2018
Available data
68
bam
68
bed bed3+
68
bed broadPeak
68
bed narrowPeak
68
bigBed broadPeak
68
bigBed narrowPeak
68
bigWig
2
fastq
Organism
68
Homo sapiens
Biosample type
63
tissue
5
primary cell
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
68
AMP
Genome assembly (visualization)
68
GRCh38
58
hg19
Lab
68
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
68 results
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DNase-seq
tissue
muscle of arm
17
brain
14
muscle of leg
13
frontal cortex
2
tibial artery
2
+ See 14 more…
primary cell
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
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