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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
8
ATAC-seq
4
total RNA-seq
1
WGBS
Assay category
47
DNA binding
8
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
47
histone
47
histone modification
34
broad histone mark
13
narrow histone mark
Date released
48
October, 2019
6
February, 2021
5
May, 2019
1
July, 2019
Available data
96
bam
91
bed narrowPeak
90
bigWig
83
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
60
Homo sapiens
Biosample type
60
tissue
Organ
628
pancreas
557
connective tissue
482
liver
422
adipose tissue
274
epithelium
196
heart
179
brain
176
blood vessel
176
vasculature
127
kidney
124
artery
66
bone element
60
limb
54
blood
54
bodily fluid
29
embryo
29
nerve
20
musculature of body
15
spleen
10
vein
8
skeleton
2
eye
1
pericardium
1
pituitary gland
Project
60
AMP
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
60
AMP-T2D consortium
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
60 results
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ChIP-seq
ATAC-seq
total RNA-seq
WGBS
tissue
tibial nerve
24
1
4
tibial artery
18
1
muscle of leg
5
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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