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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
DNase-seq
29
ChIP-seq
7
ATAC-seq
4
total RNA-seq
1
WGBS
Assay category
41
DNA accessibility
29
DNA binding
4
Transcription
1
DNA methylation
Target of assay
29
histone
29
histone modification
20
broad histone mark
9
narrow histone mark
Date released
32
June, 2019
31
October, 2019
6
February, 2021
5
May, 2019
1
July, 2019
Available data
75
bam
70
bed narrowPeak
69
bigWig
63
bigBed narrowPeak
34
bed bed3+
34
bed broadPeak
34
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
75
Homo sapiens
Biosample type
75
tissue
Organ
635
pancreas
566
connective tissue
531
liver
424
adipose tissue
294
epithelium
226
heart
217
brain
205
kidney
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
75
AMP
Genome assembly (visualization)
75
GRCh38
75
hg19
Lab
75
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
vasculature
BIOSAMPLE
ASSAY
75 results
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DNase-seq
ChIP-seq
ATAC-seq
total RNA-seq
WGBS
tissue
tibial nerve
2
24
1
4
muscle of leg
13
5
1
muscle of arm
17
distal epiphysis of femur
1
distal epiphysis of humerus
1
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