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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
7
total RNA-seq
4
Hi-C
1
WGBS
Assay category
18
DNA binding
7
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
17
control
1
histone
1
histone modification
1
narrow histone mark
Date released
21
October, 2019
5
July, 2019
3
February, 2020
1
May, 2019
Available data
113
bam
bed narrowPeak
90
bigWig
83
bigBed narrowPeak
35
bed bed3+
35
bed broadPeak
35
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
30
Homo sapiens
Biosample type
30
tissue
Organ
665
pancreas
601
connective tissue
478
adipose tissue
350
liver
304
epithelium
200
heart
160
kidney
103
vasculature
101
blood vessel
82
brain
67
artery
67
bone element
35
musculature of body
30
limb
28
eye
20
lung
19
embryo
16
nerve
15
blood
15
bodily fluid
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
Project
30
AMP
Genome assembly (visualization)
5
GRCh38
4
hg19
Lab
30
AMP-T2D consortium
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inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
30 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
11
5
tibial artery
5
1
gastrocnemius medialis
1
4
muscle of leg
1
1
islet of Langerhans
1
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