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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
total RNA-seq
22
ChIP-seq
4
Hi-C
2
single cell RNA-seq
1
WGBS
Assay category
64
Transcription
22
DNA binding
4
3D chromatin structure
1
DNA methylation
Target of assay
21
control
1
histone
1
histone modification
1
narrow histone mark
Date released
54
February, 2021
21
October, 2019
7
July, 2019
4
February, 2020
3
May, 2019
2
August, 2021
Available data
190
bam
155
bigWig
bed narrowPeak
89
bigBed narrowPeak
64
tsv
38
bed bed3+
38
bed broadPeak
38
bigBed broadPeak
6
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
91
Homo sapiens
Biosample type
54
cell line
35
tissue
2
primary cell
Organ
732
pancreas
609
connective tissue
478
adipose tissue
373
epithelium
350
liver
202
heart
171
kidney
151
bone element
103
vasculature
101
blood vessel
83
brain
67
artery
36
musculature of body
30
limb
28
eye
23
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
91
AMP
Genome assembly (visualization)
59
GRCh38
58
hg19
Lab
91
AMP-T2D consortium
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
91 results
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total RNA-seq
ChIP-seq
Hi-C
single cell RNA-seq
WGBS
cell line
smooth muscle cell of the coronary artery
52
2
tissue
tibial nerve
5
11
tibial artery
1
5
gastrocnemius medialis
1
4
coronary artery
1
2
muscle of leg
1
1
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primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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