Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ATAC-seq
4
Hi-C
3
total RNA-seq
1
ChIP-seq
Assay category
6
DNA accessibility
4
3D chromatin structure
3
Transcription
1
DNA binding
Target of assay
1
control
Date released
October, 2019
6
February, 2021
4
July, 2019
3
February, 2020
1
May, 2019
Available data
46
bam
44
bed narrowPeak
bigWig
38
bigBed narrowPeak
32
bed bed3+
32
bed broadPeak
32
bigBed broadPeak
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
14
Homo sapiens
Biosample type
14
tissue
Organ
313
pancreas
215
kidney
213
epithelium
168
heart
168
liver
113
connective tissue
101
bone element
70
vasculature
69
blood vessel
66
adipose tissue
54
brain
51
artery
34
eye
28
musculature of body
20
lung
16
skeleton
14
blood
14
bodily fluid
14
limb
9
spleen
8
embryo
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
14
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
14
AMP-T2D consortium
files.file_type!
bigWig
month_released!
October, 2019
BIOSAMPLE
ASSAY
14 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
Hi-C
total RNA-seq
ChIP-seq
tissue
gastrocnemius medialis
4
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
muscle of leg
1
+ See 5 more…
See all biosamples
Download