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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ATAC-seq
4
Hi-C
3
total RNA-seq
1
ChIP-seq
Assay category
6
DNA accessibility
4
3D chromatin structure
3
Transcription
1
DNA binding
Target of assay
control
1
histone
1
histone modification
1
narrow histone mark
Date released
6
February, 2021
4
July, 2019
3
February, 2020
1
October, 2019
Available data
97
bam
92
bed narrowPeak
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
14
Homo sapiens
Biosample type
14
tissue
Organ
270
pancreas
211
kidney
195
epithelium
149
heart
101
bone element
79
connective tissue
74
liver
61
vasculature
60
blood vessel
54
eye
47
artery
42
adipose tissue
39
brain
22
musculature of body
20
lung
16
skeleton
14
limb
8
blood
8
bodily fluid
5
gonad
5
ovary
5
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
14
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
14
AMP-T2D consortium
files.file_type!
bigWig
target.investigated_as!
control
BIOSAMPLE
ASSAY
14 results
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ATAC-seq
Hi-C
total RNA-seq
ChIP-seq
tissue
gastrocnemius medialis
4
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
islet of Langerhans
1
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