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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
54
DNase-seq
8
ATAC-seq
4
Hi-C
1
WGBS
Assay category
66
DNA binding
62
DNA accessibility
4
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
65
October, 2019
50
June, 2019
7
May, 2019
6
February, 2021
5
July, 2019
Available data
132
bam
110
bed narrowPeak
109
bigWig
102
bigBed narrowPeak
54
bed bed3+
54
bed broadPeak
54
bigBed broadPeak
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
133
Homo sapiens
Biosample type
133
tissue
Organ
617
liver
529
pancreas
368
epithelium
330
kidney
260
brain
206
connective tissue
185
heart
168
vasculature
162
blood vessel
115
limb
101
bone element
90
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
56
eye
38
nerve
24
spleen
23
embryo
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
133
AMP
Genome assembly (visualization)
110
GRCh38
110
hg19
Lab
133
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
tsv
BIOSAMPLE
ASSAY
133 results
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ChIP-seq
DNase-seq
ATAC-seq
Hi-C
WGBS
tissue
tibial nerve
35
2
1
tibial artery
23
2
1
muscle of leg
7
13
1
muscle of arm
17
renal pelvis
10
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