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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
36
DNase-seq
8
ATAC-seq
4
Hi-C
1
WGBS
Assay category
51
DNA binding
44
DNA accessibility
4
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
narrow histone mark
Date released
52
October, 2019
32
June, 2019
6
February, 2021
5
July, 2019
5
May, 2019
Available data
100
bam
78
bed narrowPeak
77
bigWig
70
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
100
Homo sapiens
Biosample type
100
tissue
Organ
557
liver
456
pancreas
319
epithelium
315
kidney
173
connective tissue
160
heart
143
brain
142
vasculature
137
blood vessel
101
bone element
100
limb
78
adipose tissue
77
artery
74
musculature of body
68
blood
68
bodily fluid
53
eye
30
nerve
22
spleen
19
lung
18
ureter
16
skeleton
16
vein
15
embryo
1
bone marrow
1
pericardium
1
pituitary gland
1
skin of body
1
thymus
Project
100
AMP
Genome assembly (visualization)
79
GRCh38
78
hg19
Lab
100
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
tsv
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
100 results
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ChIP-seq
DNase-seq
ATAC-seq
Hi-C
WGBS
tissue
tibial nerve
27
2
1
tibial artery
19
2
1
muscle of leg
5
13
1
muscle of arm
17
gastrocnemius medialis
4
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