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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
ChIP-seq
53
ATAC-seq
43
DNase-seq
1
FAIRE-seq
Assay category
103
DNA binding
97
DNA accessibility
Target of assay
95
histone
95
histone modification
61
broad histone mark
34
narrow histone mark
8
transcription factor
4
RNA binding protein
Date released
61
October, 2019
45
May, 2019
37
June, 2019
35
February, 2023
18
February, 2021
2
July, 2019
2
November, 2017
Available data
268
bam
220
bigWig
200
bed narrowPeak
143
bigBed narrowPeak
74
tsv
47
bed broadPeak
47
bigBed broadPeak
45
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
200
Homo sapiens
Biosample type
171
tissue
17
primary cell
12
cell line
Organ
441
liver
214
pancreas
203
brain
183
kidney
151
epithelium
151
heart
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
200
AMP
Genome assembly (visualization)
198
GRCh38
164
hg19
Lab
200
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
200 results
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ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
coronary artery
3
36
2
tibial nerve
24
1
2
tibial artery
18
1
2
muscle of leg
6
13
muscle of arm
17
+ See 11 more…
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
cell line
smooth muscle cell of the coronary artery
4
8
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