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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
8
ATAC-seq
4
DNase-seq
4
Hi-C
1
WGBS
Assay category
66
DNA binding
12
DNA accessibility
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
65
October, 2019
June, 2019
7
May, 2019
6
February, 2021
5
July, 2019
Available data
78
bam
60
bed narrowPeak
55
bigWig
52
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
83
Homo sapiens
Biosample type
83
tissue
Organ
596
liver
463
pancreas
303
epithelium
232
brain
185
connective tissue
162
vasculature
158
blood vessel
152
heart
148
kidney
97
bone element
89
adipose tissue
83
limb
81
artery
69
blood
69
bodily fluid
44
musculature of body
38
nerve
35
eye
25
spleen
23
embryo
22
vein
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
83
AMP
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
83
AMP-T2D consortium
month_released!
June, 2019
assay_slims!
Transcription
BIOSAMPLE
ASSAY
83 results
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ChIP-seq
ATAC-seq
DNase-seq
Hi-C
WGBS
tissue
tibial nerve
35
1
2
tibial artery
23
1
2
muscle of leg
7
1
gastrocnemius medialis
4
distal epiphysis of femur
1
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