Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
62
total RNA-seq
52
ATAC-seq
4
Hi-C
2
single cell RNA-seq
1
WGBS
Assay category
77
DNA binding
64
Transcription
52
DNA accessibility
4
3D chromatin structure
1
DNA methylation
Target of assay
51
histone
51
histone modification
34
broad histone mark
21
control
17
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
72
February, 2021
65
October, 2019
35
February, 2023
12
May, 2019
8
July, 2019
4
February, 2020
2
August, 2021
Available data
156
bam
121
bigWig
111
bed narrowPeak
64
tsv
55
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
198
Homo sapiens
Biosample type
130
tissue
66
cell line
2
primary cell
Organ
939
pancreas
728
liver
663
connective tissue
496
epithelium
489
adipose tissue
358
heart
273
kidney
248
brain
219
vasculature
217
blood vessel
159
bone element
137
artery
86
limb
69
blood
69
bodily fluid
54
eye
53
musculature of body
41
nerve
37
embryo
24
spleen
20
lung
18
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
198
AMP
Genome assembly (visualization)
165
GRCh38
130
hg19
Lab
198
AMP-T2D consortium
month_released!
June, 2019
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
198 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
Hi-C
single cell RNA-seq
WGBS
tissue
coronary artery
5
1
36
tibial nerve
35
5
1
tibial artery
23
1
1
muscle of leg
7
1
gastrocnemius medialis
1
4
+ See 8 more…
cell line
smooth muscle cell of the coronary artery
6
52
8
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
See all biosamples
Download