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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
36
DNase-seq
8
ATAC-seq
7
total RNA-seq
4
Hi-C
Assay category
59
DNA binding
44
DNA accessibility
7
Transcription
4
3D chromatin structure
DNA methylation
Target of assay
43
histone
43
histone modification
30
broad histone mark
16
control
13
narrow histone mark
Date released
69
October, 2019
32
June, 2019
May, 2019
6
February, 2021
4
July, 2019
3
February, 2020
Available data
106
bam
86
bed narrowPeak
84
bigWig
78
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
Organism
114
Homo sapiens
Biosample type
114
tissue
Organ
891
pancreas
784
liver
677
connective tissue
485
adipose tissue
466
epithelium
345
kidney
322
heart
256
brain
183
vasculature
178
blood vessel
159
bone element
136
artery
114
limb
83
musculature of body
69
blood
69
bodily fluid
60
eye
43
nerve
37
embryo
23
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
114
AMP
Genome assembly (visualization)
90
GRCh38
90
hg19
Lab
114
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
May, 2019
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
114 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
tibial nerve
35
2
1
5
tibial artery
23
2
1
1
muscle of arm
17
muscle of leg
13
gastrocnemius medialis
1
4
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