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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
36
DNase-seq
8
ATAC-seq
7
total RNA-seq
Assay category
59
DNA binding
44
DNA accessibility
7
Transcription
Target of assay
43
histone
43
histone modification
30
broad histone mark
16
control
13
narrow histone mark
Date released
69
October, 2019
32
June, 2019
May, 2019
6
February, 2021
July, 2019
3
February, 2020
Available data
106
bam
86
bed narrowPeak
84
bigWig
78
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
Organism
110
Homo sapiens
Biosample type
110
tissue
Organ
938
pancreas
781
liver
666
connective tissue
506
epithelium
479
adipose tissue
338
kidney
307
heart
240
brain
174
vasculature
169
blood vessel
159
bone element
133
artery
110
limb
79
musculature of body
69
blood
69
bodily fluid
60
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
110
AMP
Genome assembly (visualization)
90
GRCh38
90
hg19
Lab
110
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
May, 2019
July, 2019
BIOSAMPLE
ASSAY
110 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
tissue
tibial nerve
35
2
1
5
tibial artery
23
2
1
1
muscle of arm
17
muscle of leg
13
distal epiphysis of femur
1
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