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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
DNase-seq
17
ChIP-seq
8
ATAC-seq
7
total RNA-seq
Assay category
44
DNA accessibility
17
DNA binding
7
Transcription
Target of assay
49
histone
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
32
June, 2019
26
October, 2019
6
February, 2021
July, 2019
3
February, 2020
1
May, 2019
Available data
65
bam
44
bed narrowPeak
42
bigWig
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
36
bigBed narrowPeak
7
tsv
Organism
68
Homo sapiens
Biosample type
68
tissue
Organ
789
pancreas
678
liver
588
connective tissue
447
adipose tissue
418
epithelium
313
kidney
266
heart
159
bone element
153
vasculature
149
blood vessel
118
artery
81
brain
68
blood
68
bodily fluid
68
limb
57
eye
53
musculature of body
25
embryo
20
lung
19
nerve
19
spleen
18
ureter
16
skeleton
7
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
68
AMP
Genome assembly (visualization)
48
GRCh38
48
hg19
Lab
68
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
histone modification
month_released!
July, 2019
BIOSAMPLE
ASSAY
68 results
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DNase-seq
ChIP-seq
ATAC-seq
total RNA-seq
tissue
tibial nerve
2
11
1
5
muscle of arm
17
muscle of leg
13
1
tibial artery
2
5
1
1
distal epiphysis of femur
1
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