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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
36
DNase-seq
4
total RNA-seq
2
ATAC-seq
1
WGBS
Assay category
51
DNA binding
38
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
48
histone
48
histone modification
34
broad histone mark
17
control
narrow histone mark
Date released
56
October, 2019
32
June, 2019
February, 2021
5
May, 2019
1
July, 2019
Available data
94
bam
77
bigWig
72
bed narrowPeak
70
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
94
Homo sapiens
Biosample type
94
tissue
Organ
630
liver
596
pancreas
242
epithelium
138
brain
129
kidney
125
connective tissue
121
heart
94
limb
93
vasculature
89
blood vessel
59
blood
59
bodily fluid
55
adipose tissue
51
musculature of body
34
nerve
30
artery
28
embryo
22
spleen
18
ureter
14
vein
6
eye
1
pericardium
Project
94
AMP
Genome assembly (visualization)
77
GRCh38
76
hg19
Lab
94
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
narrow histone mark
month_released!
February, 2021
BIOSAMPLE
ASSAY
94 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial nerve
27
2
4
1
tibial artery
19
2
1
muscle of leg
5
13
1
muscle of arm
17
forelimb muscle
1
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