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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
DNase-seq
1
Hi-C
1
pCHi-C
Assay category
DNA binding
5
DNA accessibility
1
3D chromatin structure
Date released
3
November, 2018
2
June, 2019
1
February, 2021
1
July, 2019
Available data
190
bigWig
174
tsv
171
bam
28
bed narrowPeak
13
fastq
7
bed bed3+
6
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
3
bed bedMethyl
3
bigBed bedMethyl
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
7
Homo sapiens
Biosample type
3
primary cell
3
tissue
1
cell line
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
18
epithelium
18
ureter
16
connective tissue
13
vasculature
11
blood vessel
8
pancreas
7
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
7
AMP
Genome assembly (visualization)
7
hg19
5
GRCh38
Lab
7
AMP-T2D consortium
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
7 results
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DNase-seq
Hi-C
pCHi-C
primary cell
endothelial cell of hepatic sinusoid
1
hepatic stellate cell
1
hepatocyte
1
tissue
liver
2
right lobe of liver
1
cell line
HepG2
1
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