Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
ATAC-seq
2
DNase-seq
Assay category
397
DNA binding
19
Transcription
4
DNA accessibility
3
3D chromatin structure
2
DNA methylation
1
DNA sequencing
Date released
2
June, 2019
1
February, 2021
1
October, 2019
Available data
4
bam
4
bed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
2
bigWig
1
bed bed3
Organism
4
Homo sapiens
Biosample type
tissue
3
primary cell
1
cell line
Organ
111
epithelium
91
pancreas
26
connective tissue
15
vasculature
13
blood vessel
13
kidney
11
heart
9
blood
9
bodily fluid
8
artery
5
brain
4
liver
vein
1
eye
1
musculature of body
Project
4
AMP
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
4
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
organ_slims!
vein
biosample_type!
tissue
BIOSAMPLE
ASSAY
4 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
DNase-seq
primary cell
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
hepatocyte
1
cell line
HepG2
1
Download