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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
156
ChIP-seq
Assay category
156
DNA binding
Target of assay
357
transcription factor
254
histone modification
253
histone
156
control
133
narrow histone mark
120
broad histone mark
82
recombinant protein
67
RNA binding protein
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
56
November, 2017
32
August, 2017
23
May, 2020
13
December, 2017
11
October, 2018
6
October, 2019
6
September, 2017
5
August, 2021
2
November, 2019
1
May, 2019
1
May, 2021
Available data
143
bam
107
fastq
31
tagAlign
13
bigWig
3
bed bed3+
Organism
155
Homo sapiens
Biosample type
73
tissue
68
cell line
13
primary cell
2
in vitro differentiated cells
Organ
108
liver
48
pancreas
35
connective tissue
28
brain
27
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
156
AMP
Genome assembly (visualization)
16
hg19
3
GRCh38
Lab
152
AMP-T2D consortium
4
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
156 results
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Clear Filters
ChIP-seq
tissue
liver
43
islet of Langerhans
13
body of pancreas
9
pancreas
3
right lobe of liver
3
+ See 1 more…
cell line
HepG2
60
Panc1
6
EndoC_BH1
2
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
hepatocyte
1
in vitro differentiated cells
hepatocyte
1
pancreatic PP cell
1
See all biosamples
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