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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
WGBS
4
Hi-C
2
RRBS
Assay category
552
DNA binding
193
Transcription
29
DNA accessibility
7
DNA methylation
4
3D chromatin structure
1
DNA sequencing
Date released
4
August, 2017
3
July, 2019
1
August, 2021
1
December, 2018
1
March, 2020
1
November, 2018
Available data
4
fastq
3
bed bedMethyl
3
bigBed bedMethyl
2
bedpe bed3+
2
bigWig
2
hic
1
bam
1
bed bed3+
1
hdf5
Organism
11
Homo sapiens
Biosample type
6
tissue
3
cell line
2
primary cell
Organ
62
pancreas
61
epithelium
13
heart
12
musculature of body
11
liver
8
connective tissue
8
vasculature
7
blood vessel
6
adipose tissue
5
brain
5
kidney
5
limb
2
spleen
2
vein
1
eye
1
pericardium
Project
11
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
10
AMP-T2D consortium
1
Bing Ren, UCSD
BIOSAMPLE
ASSAY
11 results
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WGBS
Hi-C
RRBS
tissue
liver
3
1
1
right lobe of liver
1
cell line
HepG2
1
2
primary cell
endothelial cell of hepatic sinusoid
1
hepatocyte
1
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