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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
169
total RNA-seq
3
small RNA-seq
pCHi-C
Assay category
172
Transcription
Date released
143
May, 2020
9
August, 2021
7
July, 2019
5
December, 2019
5
January, 2019
1
February, 2020
1
March, 2020
1
October, 2019
Available data
681
bam
622
bigWig
465
fastq
441
bed narrowPeak
358
bigBed narrowPeak
172
tsv
86
tagAlign
63
bed broadPeak
63
bigBed broadPeak
12
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
172
Homo sapiens
Biosample type
153
tissue
14
cell line
5
primary cell
Organ
476
connective tissue
416
pancreas
400
adipose tissue
172
liver
165
heart
156
epithelium
67
blood vessel
67
vasculature
58
artery
58
bone element
24
brain
22
kidney
14
embryo
8
musculature of body
7
limb
5
eye
5
nerve
1
pericardium
1
spinal cord
Project
172
AMP
Genome assembly (visualization)
162
GRCh38
162
hg19
Lab
163
AMP-T2D consortium
9
Bing Ren, UCSD
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
172 results
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total RNA-seq
small RNA-seq
tissue
liver
147
1
right lobe of liver
3
2
cell line
HepG2
14
primary cell
hepatocyte
5
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