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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
3
DNase-seq
Assay category
46
DNA binding
3
DNA accessibility
Target of assay
46
transcription factor
19
RNA binding protein
13
recombinant protein
5
chromatin remodeller
Date released
266
November, 2017
170
May, 2020
50
December, 2017
49
November, 2018
20
August, 2017
20
May, 2022
18
August, 2021
9
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
2
June, 2019
2
March, 2020
1
February, 2021
Available data
49
bam
49
bed narrowPeak
49
bigBed narrowPeak
49
bigWig
49
fastq
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
Organism
49
Homo sapiens
Biosample type
42
cell line
7
tissue
Organ
49
liver
12
blood
12
bodily fluid
4
spleen
3
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
49
AMP
Genome assembly (visualization)
52
GRCh38
49
hg19
Lab
49
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
49 results
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ChIP-seq
DNase-seq
cell line
HepG2
42
tissue
liver
4
2
right lobe of liver
1
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