Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
168
total RNA-seq
small RNA-seq
2
pCHi-C
Assay category
168
Transcription
Date released
144
May, 2020
9
August, 2021
5
December, 2019
5
January, 2019
4
July, 2019
2
March, 2020
February, 2020
1
October, 2019
Available data
678
bam
619
bigWig
465
fastq
441
bed narrowPeak
358
bigBed narrowPeak
170
tsv
86
tagAlign
63
bed broadPeak
63
bigBed broadPeak
13
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
170
Homo sapiens
Biosample type
150
tissue
15
cell line
5
primary cell
Organ
473
connective tissue
414
pancreas
396
adipose tissue
170
liver
164
heart
156
epithelium
65
blood vessel
65
vasculature
58
bone element
56
artery
23
kidney
14
embryo
10
brain
5
musculature of body
4
eye
4
limb
4
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
170
AMP
Genome assembly (visualization)
159
GRCh38
159
hg19
Lab
161
AMP-T2D consortium
9
Bing Ren, UCSD
assay_title!
small RNA-seq
month_released!
February, 2020
BIOSAMPLE
ASSAY
170 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
pCHi-C
tissue
liver
147
1
right lobe of liver
2
cell line
HepG2
14
1
primary cell
hepatocyte
5
Download