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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
169
total RNA-seq
small RNA-seq
2
pCHi-C
Assay category
169
Transcription
Date released
144
May, 2020
9
August, 2021
5
December, 2019
5
January, 2019
4
July, 2019
2
March, 2020
1
February, 2020
1
October, 2019
Available data
677
bam
618
bigWig
465
fastq
440
bed narrowPeak
357
bigBed narrowPeak
171
tsv
86
tagAlign
62
bed broadPeak
62
bigBed broadPeak
12
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
171
Homo sapiens
Biosample type
151
tissue
15
cell line
5
primary cell
Organ
connective tissue
415
pancreas
398
adipose tissue
171
liver
167
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
23
kidney
22
brain
14
embryo
7
limb
7
musculature of body
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
171
AMP
Genome assembly (visualization)
159
GRCh38
159
hg19
Lab
162
AMP-T2D consortium
9
Bing Ren, UCSD
assay_title!
small RNA-seq
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
171 results
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Clear Filters
total RNA-seq
pCHi-C
tissue
liver
147
1
right lobe of liver
3
cell line
HepG2
14
1
primary cell
hepatocyte
5
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