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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
552
ChIP-seq
169
total RNA-seq
6
DNase-seq
5
WGBS
4
Hi-C
3
ATAC-seq
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
3
DNA accessibility
Date released
1
August, 2017
1
February, 2021
1
October, 2019
Available data
3
bam
3
bed narrowPeak
1
bed bed3
1
bigBed narrowPeak
1
bigWig
1
fastq
Organism
3
Homo sapiens
Biosample type
1
cell line
1
primary cell
1
tissue
Organ
152
pancreas
103
epithelium
75
kidney
47
heart
46
blood vessel
46
vasculature
45
artery
28
eye
25
connective tissue
12
bone element
12
skeleton
8
limb
6
adipose tissue
4
brain
3
liver
1
blood
1
bodily fluid
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
3
AMP
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
Karen Mohlke, UNC
3
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
lab.title!
Karen Mohlke, UNC
BIOSAMPLE
ASSAY
3 results
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ATAC-seq
cell line
HepG2
1
primary cell
Liver fetal (hepatocyte)
1
tissue
right lobe of liver
1
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