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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
552
ChIP-seq
189
total RNA-seq
23
ATAC-seq
6
DNase-seq
5
WGBS
4
Hi-C
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
189
Transcription
6
DNA accessibility
Date released
143
May, 2020
20
May, 2022
9
August, 2021
5
December, 2019
5
January, 2019
4
July, 2019
3
November, 2018
2
June, 2019
1
August, 2017
1
February, 2020
1
March, 2020
1
October, 2019
Available data
169
tsv
164
bam
164
bigWig
8
fastq
5
bed bed3+
5
bed broadPeak
5
bed narrowPeak
5
bigBed broadPeak
5
bigBed narrowPeak
Organism
195
Homo sapiens
Biosample type
174
tissue
14
cell line
7
primary cell
Organ
483
connective tissue
411
pancreas
400
adipose tissue
195
liver
150
epithelium
141
kidney
102
heart
72
vasculature
70
blood vessel
62
bone element
60
artery
49
brain
43
limb
39
musculature of body
23
eye
18
ureter
14
embryo
7
nerve
4
skeleton
2
vein
1
pericardium
1
spinal cord
1
spleen
Project
195
AMP
Genome assembly (visualization)
164
GRCh38
164
hg19
Lab
166
AMP-T2D consortium
20
Karen Mohlke, UNC
9
Bing Ren, UCSD
BIOSAMPLE
ASSAY
195 results
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total RNA-seq
DNase-seq
tissue
liver
167
2
right lobe of liver
3
2
cell line
HepG2
14
primary cell
hepatocyte
5
1
hepatic stellate cell
1
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