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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
552
ChIP-seq
189
total RNA-seq
23
ATAC-seq
6
DNase-seq
5
WGBS
4
Hi-C
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
6
DNA accessibility
4
3D chromatin structure
Date released
3
November, 2018
2
June, 2019
1
August, 2017
1
August, 2021
1
December, 2018
1
July, 2019
1
March, 2020
Available data
6
bed bed3+
6
bigWig
5
bam
5
bed broadPeak
5
bed narrowPeak
5
bigBed broadPeak
5
bigBed narrowPeak
4
fastq
2
bedpe bed3+
2
hic
1
hdf5
Organism
10
Homo sapiens
Biosample type
5
tissue
3
primary cell
2
cell line
Organ
82
kidney
40
limb
39
musculature of body
35
brain
33
heart
27
epithelium
18
ureter
17
pancreas
16
vasculature
14
blood vessel
10
connective tissue
10
liver
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
10
AMP
Genome assembly (visualization)
8
hg19
5
GRCh38
Lab
9
AMP-T2D consortium
1
Bing Ren, UCSD
BIOSAMPLE
ASSAY
10 results
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DNase-seq
Hi-C
tissue
liver
2
1
right lobe of liver
2
primary cell
endothelial cell of hepatic sinusoid
1
hepatic stellate cell
1
hepatocyte
1
cell line
HepG2
2
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