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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
5
total RNA-seq
1
DNase-seq
1
RRBS
Assay category
19
DNA binding
5
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
15
histone
15
histone modification
8
broad histone mark
7
narrow histone mark
2
RNA binding protein
2
control
2
transcription factor
1
chromatin remodeller
Date released
15
December, 2017
5
December, 2019
4
August, 2021
1
July, 2019
1
June, 2019
Available data
25
bam
23
bigWig
18
bed narrowPeak
15
bigBed narrowPeak
15
fastq
5
tsv
4
bed bed3+
4
tagAlign
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
Organism
26
Homo sapiens
Biosample type
15
in vitro differentiated cells
11
primary cell
Organ
26
epithelium
26
liver
Project
26
AMP
Genome assembly (visualization)
24
hg19
23
GRCh38
Lab
26
AMP-T2D consortium
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
total RNA-seq
DNase-seq
RRBS
in vitro differentiated cells
hepatocyte
15
primary cell
hepatocyte
4
5
1
1
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