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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
3
DNase-seq
1
ATAC-seq
Assay category
45
DNA binding
4
DNA accessibility
Target of assay
35
transcription factor
10
histone
10
histone modification
7
broad histone mark
3
narrow histone mark
2
RNA binding protein
2
chromatin remodeller
Date released
36
December, 2017
7
November, 2018
6
August, 2017
Available data
288
bam
265
bigWig
154
tsv
113
bed narrowPeak
83
fastq
70
tagAlign
49
bigBed narrowPeak
6
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
csv
1
hic
Organism
49
Homo sapiens
Biosample type
293
cell line
49
tissue
14
in vitro differentiated cells
2
primary cell
Organ
116
brain
88
heart
87
kidney
84
limb
62
blood vessel
62
pancreas
62
vasculature
49
liver
38
musculature of body
26
nerve
25
artery
18
ureter
13
spleen
10
adipose tissue
10
connective tissue
3
eye
Project
49
AMP
Genome assembly (visualization)
49
GRCh38
49
hg19
Lab
49
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
49 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
liver
38
2
right lobe of liver
7
1
1
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