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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
Assay category
45
DNA binding
Target of assay
336
transcription factor
82
recombinant protein
79
control
58
RNA binding protein
45
histone modification
44
histone
24
broad histone mark
23
chromatin remodeller
20
narrow histone mark
2
other context
2
other post-translational modification
Date released
17
December, 2017
16
August, 2017
5
October, 2019
4
November, 2017
3
August, 2021
Available data
83
bigWig
81
bed narrowPeak
80
bam
tagAlign
45
fastq
35
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
bed bed3+
Organism
45
Homo sapiens
Biosample type
26
tissue
12
in vitro differentiated cells
7
cell line
Organ
124
pancreas
97
heart
89
epithelium
88
brain
71
vasculature
70
blood vessel
59
connective tissue
49
limb
45
liver
30
kidney
25
adipose tissue
24
nerve
20
artery
20
musculature of body
15
vein
10
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
Project
45
AMP
Genome assembly (visualization)
42
hg19
39
GRCh38
Lab
42
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
files.file_type!
bed bed3+
tagAlign
BIOSAMPLE
ASSAY
45 results
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Clear Filters
ChIP-seq
tissue
liver
21
right lobe of liver
5
in vitro differentiated cells
hepatocyte
12
cell line
HepG2
7
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