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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
107
ChIP-seq
Assay category
107
DNA binding
Target of assay
336
transcription factor
107
control
100
histone modification
99
histone
82
recombinant protein
58
RNA binding protein
58
narrow histone mark
41
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
56
November, 2017
23
May, 2020
13
December, 2017
10
August, 2017
5
August, 2021
Available data
101
bam
77
fastq
28
tagAlign
13
bigWig
bed bed3+
Organism
107
Homo sapiens
Biosample type
60
cell line
45
tissue
1
in vitro differentiated cells
1
primary cell
Organ
107
liver
46
pancreas
34
connective tissue
28
brain
27
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
6
blood
6
bodily fluid
6
embryo
6
musculature of body
2
vein
1
eye
Project
107
AMP
Genome assembly (visualization)
13
hg19
Lab
103
AMP-T2D consortium
4
Bing Ren, UCSD
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
107 results
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ChIP-seq
cell line
HepG2
60
tissue
liver
42
right lobe of liver
3
in vitro differentiated cells
hepatocyte
1
primary cell
hepatocyte
1
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