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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
Assay category
77
DNA binding
Target of assay
324
transcription factor
100
control
82
recombinant protein
77
histone modification
76
histone
57
RNA binding protein
48
narrow histone mark
28
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
27
May, 2020
17
December, 2017
15
November, 2017
13
August, 2017
5
October, 2019
Available data
83
bigWig
81
bed narrowPeak
80
bam
58
tagAlign
45
fastq
35
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
bed bed3+
Organism
77
Homo sapiens
Biosample type
50
tissue
15
cell line
12
in vitro differentiated cells
Organ
166
brain
125
pancreas
90
epithelium
77
liver
71
vasculature
70
blood vessel
61
heart
48
limb
34
connective tissue
30
kidney
24
nerve
20
artery
15
vein
14
musculature of body
10
embryo
6
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
eye
1
pituitary gland
Project
77
AMP
Genome assembly (visualization)
77
hg19
67
GRCh38
Lab
77
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
77 results
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Clear Filters
ChIP-seq
tissue
liver
45
right lobe of liver
5
cell line
HepG2
15
in vitro differentiated cells
hepatocyte
12
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