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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
ChIP-seq
Assay category
89
DNA binding
Target of assay
294
transcription factor
108
control
89
histone modification
88
histone
82
recombinant protein
54
RNA binding protein
54
narrow histone mark
34
broad histone mark
19
chromatin remodeller
1
other context
1
other post-translational modification
Date released
33
August, 2017
27
May, 2020
17
December, 2017
6
August, 2021
5
October, 2019
1
November, 2017
Available data
83
bigWig
81
bed narrowPeak
80
bam
58
tagAlign
45
fastq
35
bigBed narrowPeak
14
bed broadPeak
bigBed broadPeak
3
bed bed3+
Organism
89
Homo sapiens
Biosample type
70
tissue
12
in vitro differentiated cells
4
cell line
3
primary cell
Organ
184
brain
151
pancreas
89
epithelium
89
liver
78
connective tissue
67
blood vessel
67
vasculature
62
heart
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
13
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
89
AMP
Genome assembly (visualization)
69
hg19
58
GRCh38
Lab
86
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
tissue
liver
65
right lobe of liver
5
in vitro differentiated cells
hepatocyte
12
cell line
HepG2
4
primary cell
hepatocyte
3
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