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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ChIP-seq
Assay category
44
DNA binding
Target of assay
338
transcription factor
82
recombinant protein
80
control
58
RNA binding protein
45
histone modification
44
histone
24
broad histone mark
23
chromatin remodeller
20
narrow histone mark
2
other context
2
other post-translational modification
Date released
17
December, 2017
15
August, 2017
5
October, 2019
4
November, 2017
3
August, 2021
Available data
82
bigWig
80
bed narrowPeak
79
bam
tagAlign
44
fastq
35
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
3
bed bed3+
Organism
44
Homo sapiens
Biosample type
25
tissue
12
in vitro differentiated cells
7
cell line
Organ
136
pancreas
89
epithelium
88
brain
71
vasculature
70
blood vessel
62
heart
59
connective tissue
49
limb
44
liver
30
kidney
25
adipose tissue
24
nerve
20
artery
20
musculature of body
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
Project
44
AMP
Genome assembly (visualization)
41
hg19
38
GRCh38
Lab
41
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
44 results
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Clear Filters
ChIP-seq
tissue
liver
20
right lobe of liver
5
in vitro differentiated cells
hepatocyte
12
cell line
HepG2
7
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