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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
Assay category
39
DNA binding
Target of assay
338
transcription factor
108
control
98
histone modification
97
histone
82
recombinant protein
58
RNA binding protein
58
narrow histone mark
39
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
19
August, 2017
10
December, 2017
8
November, 2017
October, 2019
2
August, 2021
Available data
27
bigWig
26
bam
26
bed narrowPeak
25
fastq
21
bigBed narrowPeak
18
tagAlign
8
bed broadPeak
8
bigBed broadPeak
1
bed bed3+
Organism
39
Homo sapiens
Biosample type
22
tissue
9
cell line
7
in vitro differentiated cells
1
primary cell
Organ
74
pancreas
67
brain
54
heart
44
connective tissue
39
liver
32
epithelium
22
blood vessel
22
vasculature
20
adipose tissue
20
musculature of body
12
kidney
4
embryo
4
limb
4
spleen
Project
39
AMP
Genome assembly (visualization)
27
hg19
25
GRCh38
Lab
38
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
6
inconsistent control read length
files.file_type!
vcf
month_released!
October, 2019
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ChIP-seq
tissue
liver
19
right lobe of liver
3
cell line
HepG2
9
in vitro differentiated cells
hepatocyte
7
primary cell
hepatocyte
1
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