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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
DNase-seq
1
Hi-C
1
pCHi-C
Assay category
6
DNA binding
1
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
narrow histone mark
2
transcription factor
1
broad histone mark
1
control
Date released
3
August, 2017
3
August, 2021
1
February, 2021
1
July, 2019
Available data
676
bam
617
bigWig
462
fastq
436
bed narrowPeak
353
bigBed narrowPeak
174
tsv
86
tagAlign
58
bed broadPeak
58
bigBed broadPeak
8
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
8
Homo sapiens
Biosample type
4
primary cell
3
tissue
1
cell line
Organ
22
pancreas
19
connective tissue
8
liver
5
epithelium
4
adipose tissue
3
brain
3
embryo
2
blood vessel
2
vasculature
1
musculature of body
Project
8
AMP
Genome assembly (visualization)
8
hg19
6
GRCh38
Lab
8
AMP-T2D consortium
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
8 results
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ChIP-seq
Hi-C
pCHi-C
primary cell
hepatocyte
3
endothelial cell of hepatic sinusoid
1
tissue
liver
3
cell line
HepG2
1
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