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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
DNase-seq
4
ChIP-seq
1
Hi-C
1
pCHi-C
Assay category
4
DNA binding
1
3D chromatin structure
Target of assay
3
histone
3
histone modification
narrow histone mark
2
transcription factor
1
broad histone mark
1
control
Date released
3
August, 2017
1
August, 2021
1
February, 2021
1
July, 2019
Available data
626
bam
565
bigWig
443
fastq
385
bed narrowPeak
339
bigBed narrowPeak
174
tsv
52
bed broadPeak
52
bigBed broadPeak
46
tagAlign
6
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
6
Homo sapiens
Biosample type
3
tissue
2
primary cell
1
cell line
Organ
19
connective tissue
16
pancreas
6
liver
4
adipose tissue
3
brain
3
epithelium
2
blood vessel
2
embryo
2
vasculature
1
musculature of body
Project
6
AMP
Genome assembly (visualization)
6
hg19
4
GRCh38
Lab
6
AMP-T2D consortium
assay_title!
DNase-seq
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
6 results
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Clear Filters
ChIP-seq
Hi-C
pCHi-C
tissue
liver
3
primary cell
endothelial cell of hepatic sinusoid
1
hepatocyte
1
cell line
HepG2
1
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