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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
5
DNase-seq
1
Hi-C
1
pCHi-C
Assay category
6
DNA binding
5
DNA accessibility
1
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
narrow histone mark
2
transcription factor
1
broad histone mark
1
control
Date released
3
August, 2017
3
August, 2021
3
November, 2018
2
June, 2019
1
February, 2021
1
July, 2019
Available data
681
bam
622
bigWig
465
fastq
441
bed narrowPeak
358
bigBed narrowPeak
174
tsv
86
tagAlign
63
bed broadPeak
63
bigBed broadPeak
13
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
13
Homo sapiens
Biosample type
6
primary cell
6
tissue
1
cell line
Organ
78
kidney
36
limb
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
13
AMP
Genome assembly (visualization)
13
hg19
11
GRCh38
Lab
13
AMP-T2D consortium
organ_slims!
brain
BIOSAMPLE
ASSAY
13 results
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Clear Filters
ChIP-seq
DNase-seq
Hi-C
pCHi-C
primary cell
hepatocyte
3
1
endothelial cell of hepatic sinusoid
1
hepatic stellate cell
1
tissue
liver
3
2
right lobe of liver
1
cell line
HepG2
1
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