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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
DNase-seq
3
ChIP-seq
1
Hi-C
1
pCHi-C
Assay category
5
DNA accessibility
3
DNA binding
1
3D chromatin structure
Target of assay
histone
3
histone modification
2
narrow histone mark
2
transcription factor
1
broad histone mark
1
control
Date released
3
August, 2017
3
November, 2018
2
June, 2019
1
February, 2021
1
July, 2019
Available data
602
bam
540
bigWig
421
fastq
361
bed narrowPeak
323
bigBed narrowPeak
174
tsv
49
bed broadPeak
49
bigBed broadPeak
28
tagAlign
10
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
10
Homo sapiens
Biosample type
6
tissue
3
primary cell
1
cell line
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
27
connective tissue
18
epithelium
18
ureter
17
pancreas
13
vasculature
11
blood vessel
10
liver
6
adipose tissue
4
artery
4
eye
2
nerve
2
vein
1
embryo
1
spleen
Project
10
AMP
Genome assembly (visualization)
10
hg19
8
GRCh38
Lab
10
AMP-T2D consortium
target.investigated_as!
histone
BIOSAMPLE
ASSAY
10 results
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Clear Filters
DNase-seq
ChIP-seq
Hi-C
pCHi-C
tissue
liver
2
3
right lobe of liver
1
primary cell
endothelial cell of hepatic sinusoid
1
hepatic stellate cell
1
hepatocyte
1
cell line
HepG2
1
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