Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
DNase-seq
4
ChIP-seq
1
Hi-C
1
pCHi-C
Assay category
5
DNA accessibility
4
DNA binding
1
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
narrow histone mark
transcription factor
1
broad histone mark
1
control
Date released
3
August, 2021
3
November, 2018
2
June, 2019
1
August, 2017
1
February, 2021
1
July, 2019
Available data
355
bam
289
bigWig
174
tsv
138
fastq
112
bed narrowPeak
86
tagAlign
44
bigBed narrowPeak
19
bed broadPeak
19
bigBed broadPeak
11
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
11
Homo sapiens
Biosample type
6
primary cell
4
tissue
1
cell line
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
22
pancreas
21
epithelium
18
ureter
17
connective tissue
13
vasculature
11
blood vessel
11
liver
4
artery
4
eye
3
embryo
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
11
AMP
Genome assembly (visualization)
11
hg19
9
GRCh38
Lab
11
AMP-T2D consortium
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
11 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
Hi-C
pCHi-C
primary cell
hepatocyte
1
3
endothelial cell of hepatic sinusoid
1
hepatic stellate cell
1
tissue
liver
2
1
right lobe of liver
1
cell line
HepG2
1
Download