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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
Assay category
59
DNA binding
DNA accessibility
Target of assay
44
transcription factor
15
histone
15
histone modification
8
broad histone mark
7
narrow histone mark
4
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
58
November, 2017
1
August, 2017
Available data
1252
bam
1148
bigWig
652
tsv
558
fastq
471
bed narrowPeak
367
bigBed narrowPeak
108
tagAlign
59
bed broadPeak
58
bigBed broadPeak
23
bed bed3+
6
bed bedMethyl
6
bigBed bedMethyl
3
bedpe bed3+
3
tar
2
hdf5
2
hic
1
csv
1
vcf
Organism
59
Homo sapiens
Biosample type
58
cell line
1
tissue
Organ
58
liver
15
brain
13
musculature of body
12
pancreas
6
epithelium
6
vasculature
4
blood vessel
2
vein
1
adipose tissue
1
connective tissue
Project
59
AMP
Genome assembly (visualization)
59
hg19
44
GRCh38
Lab
59
AMP-T2D consortium
Audit category:
13
inconsistent control read length
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
59 results
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ChIP-seq
cell line
HepG2
58
tissue
subcutaneous abdominal adipose tissue
1
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