Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
5
DNase-seq
Assay category
54
DNA binding
5
DNA accessibility
Target of assay
44
transcription factor
14
histone
14
histone modification
8
broad histone mark
6
narrow histone mark
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
54
November, 2017
3
November, 2018
2
June, 2019
Available data
624
bam
566
bigWig
408
fastq
385
bed narrowPeak
303
bigBed narrowPeak
174
tsv
86
tagAlign
59
bed broadPeak
59
bigBed broadPeak
13
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
2
bedpe bed3+
2
hic
2
tar
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
59
Homo sapiens
Biosample type
54
cell line
3
tissue
2
primary cell
Organ
78
kidney
59
liver
46
musculature of body
44
brain
36
limb
30
heart
21
pancreas
20
epithelium
18
ureter
15
vasculature
12
blood vessel
10
connective tissue
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
59
AMP
Genome assembly (visualization)
59
hg19
46
GRCh38
Lab
59
AMP-T2D consortium
Audit category:
11
inconsistent control read length
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
59 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
cell line
HepG2
54
tissue
liver
2
right lobe of liver
1
primary cell
hepatic stellate cell
1
hepatocyte
1
Download