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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
164
total RNA-seq
3
small RNA-seq
2
pCHi-C
Assay category
167
Transcription
Date released
144
May, 2020
9
August, 2021
7
July, 2019
5
December, 2019
January, 2019
2
March, 2020
1
February, 2020
1
October, 2019
Available data
676
bam
617
bigWig
460
fastq
441
bed narrowPeak
358
bigBed narrowPeak
169
tsv
86
tagAlign
63
bed broadPeak
63
bigBed broadPeak
13
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
169
Homo sapiens
Biosample type
154
tissue
10
cell line
5
primary cell
Organ
478
connective tissue
417
pancreas
401
adipose tissue
169
liver
168
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
169
AMP
Genome assembly (visualization)
157
GRCh38
157
hg19
Lab
160
AMP-T2D consortium
9
Bing Ren, UCSD
month_released!
January, 2019
BIOSAMPLE
ASSAY
169 results
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total RNA-seq
small RNA-seq
pCHi-C
tissue
liver
147
1
1
right lobe of liver
3
2
cell line
HepG2
9
1
primary cell
hepatocyte
5
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